Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903541.1_cds_XP_016453648.1_47752
CDS Infomation

[gene=LOC107777986] [db_xref=GeneID:107777986] [protein=transcription factor bHLH112-like] [protein_id=XP_016453648.1] [location=complement(join(19457..19609,19707..19760,20840..20905,21063..21128,21258..21365,21703..22291,22531..22913))] [gbkey=CDS]
Sequence

ATGGCAGAAGAATTTCAACTAGGTAGAGGAAACTGGTGGGAGTCGTCATCATCATCATCA
ACATCATCGTCTAGGAATAATAAGTTTGAAAGTGGAATATTATCATCTACTACTATGCCT
TCAGTATCCACCGCACTAAATAGCATGGCAAACAACTTTGGTTGTTGGCAGACAGAATTT
GAGGATATTAAAGCTAAATCCTCCTTGAATCCCATGTCTGTGTCGGGGTCTGATAATAGC
TCTATGGTTTTTCCGGCTGATTCCCAGAAACTTCACGCCTCTGAATCTTCCGTCGGAGGA
GGCGTTTTATCTGGTGGTCCAAATTTGCAAATCGTGGGCTTAGGTCTATCATCCCAAGGA
CTTGATTGGAACCAACCTTTCTTCCGAGGTGACAAAGCTGGGAGTGGTTTTCGTTCCATA
CTTGAAGAAGGCTTGAGCTCGGATCCAAATTATCAGCAAGAAGGATCGAGTCAGCAAGAT
CATCATTGGACGCAGAAAATATATCCTGGGAATTCTGATGGTTCTTCAGTGAATGACTAT
AATAATAAACAAATGGACCGGGGTATTTCTTTAGACCATCAACCAGTATTTAATGCTCCA
AATATGAGCTCGAATCTTGATAACGCACCATATGGAAGTCCTTCAAATATGTTACAAGGA
CTCTTAATATCTGATAGTCAGCAAGAATCCAACTTTACAAGTGCTAGATCGCTATATTAT
CCTCCCTATAACCCATCGAATTGTGACGTCAATCCTGCAGCAGCTGATGTAATGCCTACT
TCATCATCTTCTTCTTCTTGGTCTAAATTTCCGAAACAGCAGTGGCCGCTGCCGCCGCCT
CACGGCCAGTCGCATTTCTCGGGCACTCCTTTCTGGAATGCCACGTCAGCTGCCATGGAA
GATGTTCGCTCAGGTTTCCTCCCATCTATACATCAGCAGCTGCCCAACCCAACAGTTGAT
ATGAAACCTAAGCATACAGCTGAAGTTAGGAATATAAGAACAATAGCAAAGAAAAGTAGC
AGTGAAACGTCAAATAAGAGACCACGGAATGAAACGCCATCTCAAATGCCAGCTTTTAAG
GTGAGGAAAGAAAAGATGGGAGACAGAATCACTACCCTTCAACAATTAGTCTCACCTTTT
GGAAAGACTGATACAGCTTCTGTGCTCTCCGAAGCGATTGAATACATAAAATTCCTCCAT
GAGCAAGTCAATGTCTTAAGCACCCCATACATGAAAAGTGGAGCTTCCATGCAGCAGCAT
CAGCAGACTAGTGATAAATCCAATGTTAATCCAGAAGTAGCAAAGCAAGATCTTAGAGGT
CGAGGATTATGTTTGGTCCCAGTTTCTAGCACCTTTCCCGTAACTCATGAAACAACAGTA
GATTTTTGGACACCAACATTTGGAGGAACATTCAGATAA

Peptide Sequence

PEP ID

XP_016453648.1
PEP Infomation

PREDICTED: transcription factor bHLH112-like [Nicotiana tabacum]
Sequence

MAEEFQLGRGNWWESSSSSSTSSSRNNKFESGILSSTTMPSVSTALNSMANNFGCWQTEF
EDIKAKSSLNPMSVSGSDNSSMVFPADSQKLHASESSVGGGVLSGGPNLQIVGLGLSSQG
LDWNQPFFRGDKAGSGFRSILEEGLSSDPNYQQEGSSQQDHHWTQKIYPGNSDGSSVNDY
NNKQMDRGISLDHQPVFNAPNMSSNLDNAPYGSPSNMLQGLLISDSQQESNFTSARSLYY
PPYNPSNCDVNPAAADVMPTSSSSSSWSKFPKQQWPLPPPHGQSHFSGTPFWNATSAAME
DVRSGFLPSIHQQLPNPTVDMKPKHTAEVRNIRTIAKKSSSETSNKRPRNETPSQMPAFK
VRKEKMGDRITTLQQLVSPFGKTDTASVLSEAIEYIKFLHEQVNVLSTPYMKSGASMQQH
QQTSDKSNVNPEVAKQDLRGRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR

Transcript Sequence

Gene sequence data has not been registered.